rs55787249 chr9:88741544 G>A
- Sequence
ataagagatttctgttgttttagc[G/A]cccccttgtgtggttctttgttgt
- ASB in cell types
- GM18505 (female B-cells Lymphoblastoid Cell Lines) GM17942 (lymphoblastoid cell) GM23338 bipolar neuron
- ASB for transcription factors
- CTCF_HUMAN RAD21_HUMAN
View in PheLiGe Color scale
-log10 FDR of Ref (G) ASB
-log10 FDR of Alt (A) ASB
Details
Transcription factors
Cell types
Uniprot ID | Effect size Ref | Effect size Alt | FDR Ref | FDR Alt | Mean BAD | Motif fold change | Motif concordance | |
|---|---|---|---|---|---|---|---|---|
| CTCF_HUMAN | 2.69 | -0.04 | 1.45 | -3.42 | Concordant | |||
| RAD21_HUMAN | 1.34 | -1.13 | 1.00 | n/a | n/a |
Items per page:
1 – 2 of 2
Motif analysis
