rs557891075 chr6:125790661 C>T
- Sequence
ccccgcaaccgctgtgaggcgcag[C/T]gcgcgccactggccgggaggagct
- ASB in cell types
- GM19193 (female B-cells Lymphoblastoid Cell Lines)
- ASB for transcription factors
- CTCF_HUMAN
View in PheLiGe Color scale
-log10 FDR of Ref (C) ASB
-log10 FDR of Alt (T) ASB
Details
Transcription factors
Cell types
Uniprot ID | Effect size Ref | Effect size Alt | FDR Ref | FDR Alt | Mean BAD | Motif fold change | Motif concordance | |
|---|---|---|---|---|---|---|---|---|
| CTCF_HUMAN | -2.52 | 2.62 | 1.00 | -0.96 | Weak Discordant |
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Motif analysis
