rs55792246 chr2:171409612 C>T
- Sequence
cactgggtgaggatcaagtagaca[C/T]ggcatagatggggaaattgtctta
- ASB in cell types
- GM12878 (female B-cells lymphoblastoid cell line)
- ASB for transcription factors
- IKZF2_HUMAN IKZF1_HUMAN STAG1_HUMAN ENL_HUMAN
View in PheLiGe Color scale
-log10 FDR of Ref (C) ASB
-log10 FDR of Alt (T) ASB
Details
Transcription factors
Cell types
Uniprot ID | Effect size Ref | Effect size Alt | FDR Ref | FDR Alt | Mean BAD | Motif fold change | Motif concordance | |
|---|---|---|---|---|---|---|---|---|
| IKZF2_HUMAN | 3.71 | -4.05 | 1.00 | n/a | n/a | |||
| IKZF1_HUMAN | 2.57 | -4.57 | 1.50 | n/a | n/a | |||
| STAG1_HUMAN | 2.38 | -0.12 | 1.17 | n/a | n/a | |||
| ENL_HUMAN | 2.50 | -2.08 | 1.50 | n/a | n/a |
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