rs55793026 chr16:12547484 A>G
- Sequence
gggaaggggtattctcaaagtaga[A/G]ctaccagaacttgctggtttcaat
- ASB in cell types
- GM12878 (female B-cells lymphoblastoid cell line) CTV-1 (Adult T acute lymphoblastic leukemia) GM12891 (male B- cells lymphoblastoid cell line) MDM(monocyte derived macrophages)
- ASB for transcription factors
- FOXK2_HUMAN RUNX3_HUMAN ZN217_HUMAN TRI22_HUMAN
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-log10 FDR of Ref (A) ASB
-log10 FDR of Alt (G) ASB
Details
Transcription factors
Cell types
Uniprot ID | Effect size Ref | Effect size Alt | FDR Ref | FDR Alt | Mean BAD | Motif fold change | Motif concordance | |
|---|---|---|---|---|---|---|---|---|
| FOXK2_HUMAN | 2.73 | -2.47 | 1.00 | n/a | No Hit | |||
| RUNX3_HUMAN | 2.38 | -1.98 | 1.50 | n/a | No Hit | |||
| ZN217_HUMAN | 2.16 | -1.83 | 1.00 | n/a | n/a | |||
| TRI22_HUMAN | 1.61 | -0.56 | 1.00 | n/a | n/a |
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