rs55807696 chr1:176857839 C>T
- Sequence
aaacggcatgtaaggcacattcag[C/T]cttagttttatctgtgggcactta
- ASB in cell types
- BEAS-2B (bronchial epithelium)
- ASB for transcription factors
- GCR_HUMAN
View in PheLiGe Color scale
-log10 FDR of Ref (C) ASB
-log10 FDR of Alt (T) ASB
Details
Transcription factors
Cell types
Uniprot ID | Effect size Ref | Effect size Alt | FDR Ref | FDR Alt | Mean BAD | Motif fold change | Motif concordance | |
|---|---|---|---|---|---|---|---|---|
| GCR_HUMAN | 0.09 | 2.78 | 1.00 | 3.65 | Concordant |
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Motif analysis
