rs55808940 chr6:787160 G>C
- Sequence
ccatactgctgccttctagcggtg[G/C]agtgaagtatcacacacaatttaa
- ASB in cell types
- GM02255 (Lymphoblastoid Cell Lines)
- ASB for transcription factors
- CTCF_HUMAN
View in PheLiGe Color scale
-log10 FDR of Ref (G) ASB
-log10 FDR of Alt (C) ASB
Details
Transcription factors
Cell types
Uniprot ID | Effect size Ref | Effect size Alt | FDR Ref | FDR Alt | Mean BAD | Motif fold change | Motif concordance | |
|---|---|---|---|---|---|---|---|---|
| CTCF_HUMAN | 1.14 | n/a | 6.00 | -1.31 | Weak Concordant |
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Motif analysis
