rs55810826 chr1:203305490 G>A
- Sequence
cccccctacctccctggacctcct[G/A]aaaaacgctgcccggggaaagtcc
- ASB in cell types
- MCF7 (Invasive ductal breast carcinoma) MDM(monocyte derived macrophages) 22RV1 (prostate carcinoma) HUVEC-C (HUVEC, umbilical vein endothelial cells)
- ASB for transcription factors
- ANDR_HUMAN SRBP2_HUMAN TF65_HUMAN
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-log10 FDR of Ref (G) ASB
-log10 FDR of Alt (A) ASB
Details
Transcription factors
Cell types
Uniprot ID | Effect size Ref | Effect size Alt | FDR Ref | FDR Alt | Mean BAD | Motif fold change | Motif concordance | |
|---|---|---|---|---|---|---|---|---|
| ANDR_HUMAN | 1.90 | 1.20 | 2.40 | n/a | No Hit | |||
| SRBP2_HUMAN | 2.21 | -1.25 | 2.00 | n/a | No Hit | |||
| TF65_HUMAN | 1.85 | 0.54 | 2.67 | n/a | No Hit |
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