rs55817227 chr12:122638023 T>C
- Sequence
gtggtggcactagaacttaacaga[T/C]gtgatggactgtcacgcttctttg
- ASB in cell types
- GM02255 (Lymphoblastoid Cell Lines) GM18486 (Lymphoblastoid Cell Lines)
- ASB for transcription factors
- CTCF_HUMAN STAG1_HUMAN
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-log10 FDR of Ref (T) ASB
-log10 FDR of Alt (C) ASB
Details
Transcription factors
Cell types
Uniprot ID | Effect size Ref | Effect size Alt | FDR Ref | FDR Alt | Mean BAD | Motif fold change | Motif concordance | |
|---|---|---|---|---|---|---|---|---|
| CTCF_HUMAN | 0.74 | 0.41 | 1.19 | n/a | No Hit | |||
| STAG1_HUMAN | 0.95 | -0.00 | 1.17 | n/a | n/a |
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