rs55818129 chr5:39424990 T>G

Sequence
tggcagctgaggactccccaggaa[T/G]gtgccaggatgtttttgctgcctg
ASB in cell types
CD34+ hematopoietic stem cells
ASB for transcription factors
TIF1B_HUMAN CDN1B_HUMAN

Color scale

color scale ref
-log10 FDR of Ref (T) ASB
color scale alt
-log10 FDR of Alt (G) ASB

Details

Uniprot ID
Effect size Ref
Effect size Alt
FDR Ref
FDR Alt
Mean BAD
Motif fold change
Motif concordance
TIF1B_HUMAN 2.60 n/a 0.021.00 2.00 n/a n/a
CDN1B_HUMAN 1.60 0.09 0.040.97 1.86 n/a n/a
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Motif analysis

No data available

Genetic associations

GTEx eQTL Adipose_Visceral_Omentum,  Artery_Tibial,  Brain_Cerebellar_Hemisphere,  Pituitary,  Thyroid

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