rs55819558 chr3:175144528 T>C
- Sequence
tattgagaaaatatacagaaagag[T/C]gaaactttcttatgattgcgcaat
- ASB in cell types
- THP-1 (acute monocytic leukemia) SUM159PT (Triple negative breast cancer) Ishikawa (endometrial adenocarcinoma)
View in PheLiGe Color scale
-log10 FDR of Ref (T) ASB
-log10 FDR of Alt (C) ASB
Details
Transcription factors
Cell types
Cell type | Effect size Ref | Effect size Alt | FDR Ref | FDR Alt | Mean BAD | |
|---|---|---|---|---|---|---|
| THP-1 (acute monocytic leukemia) | 1.20 | 0.32 | 1.00 | |||
| SUM159PT (Triple negative breast cancer) | 1.13 | -0.49 | 1.00 | |||
| Ishikawa (endometrial adenocarcinoma) | -0.68 | 1.83 | 2.00 |
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