rs55821428 chr22:24011169 A>G
- Sequence
gcacacacgcgcacacacgcgcgc[A/G]cgcgcgcgcgcgccgcccaagggt
- ASB in cell types
- GM12878 (female B-cells lymphoblastoid cell line) adult erythroblasts
- ASB for transcription factors
- RBBP5_HUMAN FOXK2_HUMAN IKZF2_HUMAN HTF4_HUMAN
View in PheLiGe Color scale
-log10 FDR of Ref (A) ASB
-log10 FDR of Alt (G) ASB
Details
Transcription factors
Cell types
Uniprot ID | Effect size Ref | Effect size Alt | FDR Ref | FDR Alt | Mean BAD | Motif fold change | Motif concordance | |
|---|---|---|---|---|---|---|---|---|
| RBBP5_HUMAN | 2.94 | n/a | 2.00 | n/a | n/a | |||
| FOXK2_HUMAN | 2.30 | -4.03 | 1.50 | n/a | No Hit | |||
| IKZF2_HUMAN | 1.96 | -4.10 | 1.50 | n/a | n/a | |||
| HTF4_HUMAN | 2.54 | -2.26 | 1.00 | n/a | No Hit | |||
| BMI1_HUMAN | 2.67 | -2.54 | 1.00 | n/a | n/a |
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