rs558280717 chr4:48831046 T>C
- Sequence
cccgcagtgaggtctgacgtcatt[T/C]cctgccgtaagtatacagtgcctc
- ASB in cell types
- Jurkat (T-cells)
- ASB for transcription factors
- GABPA_HUMAN
View in PheLiGe Color scale
-log10 FDR of Ref (T) ASB
-log10 FDR of Alt (C) ASB
Details
Transcription factors
Cell types
Uniprot ID | Effect size Ref | Effect size Alt | FDR Ref | FDR Alt | Mean BAD | Motif fold change | Motif concordance | |
|---|---|---|---|---|---|---|---|---|
| GABPA_HUMAN | 1.79 | -3.52 | 1.50 | -4.23 | Concordant |
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Motif analysis
