rs55829990 chr15:63498443 T>C
- Sequence
aagacccgtgtagccctgagctgc[T/C]gaatcttcagtgcctggcacgtgg
- ASB in cell types
- GM12878 (female B-cells lymphoblastoid cell line) primary B-CLL cells
- ASB for transcription factors
- ZN687_HUMAN BRD4_HUMAN RAD51_HUMAN PKNX1_HUMAN
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-log10 FDR of Ref (T) ASB
-log10 FDR of Alt (C) ASB
Details
Transcription factors
Cell types
Uniprot ID | Effect size Ref | Effect size Alt | FDR Ref | FDR Alt | Mean BAD | Motif fold change | Motif concordance | |
|---|---|---|---|---|---|---|---|---|
| ZN687_HUMAN | -2.12 | 2.37 | 1.00 | n/a | n/a | |||
| BRD4_HUMAN | 2.50 | -3.90 | 2.00 | n/a | n/a | |||
| RAD51_HUMAN | -1.63 | 2.19 | 1.00 | n/a | n/a | |||
| PKNX1_HUMAN | -1.81 | 2.20 | 1.00 | n/a | No Hit |
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