rs558402168 chr6:15320846 C>G
- Sequence
gcaagaatatgattcattctctct[C/G]tctctctgtgtgtgtgtgtgtgtg
- ASB in cell types
- GM12878 (female B-cells lymphoblastoid cell line)
- ASB for transcription factors
- IKZF2_HUMAN NFAC3_HUMAN IKZF1_HUMAN TADBP_HUMAN
View in PheLiGe Color scale
-log10 FDR of Ref (C) ASB
-log10 FDR of Alt (G) ASB
Details
Transcription factors
Cell types
Uniprot ID | Effect size Ref | Effect size Alt | FDR Ref | FDR Alt | Mean BAD | Motif fold change | Motif concordance | |
|---|---|---|---|---|---|---|---|---|
| IKZF2_HUMAN | 3.39 | n/a | 1.50 | n/a | n/a | |||
| NFAC3_HUMAN | 2.63 | -2.67 | 1.00 | n/a | No Hit | |||
| IKZF1_HUMAN | 1.74 | -1.39 | 1.25 | n/a | n/a | |||
| TADBP_HUMAN | 2.63 | -2.67 | 1.00 | n/a | n/a |
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