rs55848325 chr11:66510683 T>C
- Sequence
gatggccgctgcgtcctcatcgga[T/C]tccgacgcctgcggagctgagagg
- ASB in cell types
- GM12878 (female B-cells lymphoblastoid cell line) K562 (myelogenous leukemia)
View in PheLiGe Color scale
-log10 FDR of Ref (T) ASB
-log10 FDR of Alt (C) ASB
Details
Transcription factors
Cell types
Cell type | Effect size Ref | Effect size Alt | FDR Ref | FDR Alt | Mean BAD | |
|---|---|---|---|---|---|---|
| GM12878 (female B-cells lymphoblastoid cell line) | 0.82 | 0.61 | 1.03 | |||
| K562 (myelogenous leukemia) | 2.46 | -4.69 | 2.00 |
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