rs55861667 chr2:28664629 A>G

Sequence
acagagcggacagtataagtgaac[A/G]gctgatgagagatgctgaataaag
ASB in cell types
HCASMC (Human coronary artery smooth muscle cells)
ASB for transcription factors
TCF21_HUMAN

Color scale

color scale ref
-log10 FDR of Ref (A) ASB
color scale alt
-log10 FDR of Alt (G) ASB

Details

Uniprot ID
Effect size Ref
Effect size Alt
FDR Ref
FDR Alt
Mean BAD
Motif fold change
Motif concordance
TCF21_HUMAN 3.17 -2.85 5.8·10-61.00 1.00 -3.57 Concordant
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Motif analysis

TCF21_HUMAN Concordant
TCF21_HUMAN pic

Genetic associations

GTEx eQTL Whole_Blood

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