rs559697387 chr3:138916143 G>T
- Sequence
acagaagtcagggcgccacctggc[G/T]gccgcagcccacagcccacagccc
- ASB in cell types
- GM19193 (female B-cells Lymphoblastoid Cell Lines)
- ASB for transcription factors
- CTCF_HUMAN STAG1_HUMAN
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-log10 FDR of Ref (G) ASB
-log10 FDR of Alt (T) ASB
Details
Transcription factors
Cell types
Uniprot ID | Effect size Ref | Effect size Alt | FDR Ref | FDR Alt | Mean BAD | Motif fold change | Motif concordance | |
|---|---|---|---|---|---|---|---|---|
| CTCF_HUMAN | 2.20 | -2.20 | 1.00 | -6.96 | Concordant | |||
| STAG1_HUMAN | 2.04 | -2.04 | 1.00 | n/a | n/a |
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Motif analysis
