rs561400135 chr2:156335762 A>T
- Sequence
agagaatcactcacacacacacac[A/T]cacacacacacacacacacacaca
- ASB in cell types
- K562 (myelogenous leukemia) GM12878 (female B-cells lymphoblastoid cell line) RWPE2
- ASB for transcription factors
- MCM3_HUMAN KDM1A_HUMAN ARI1B_HUMAN FOXK2_HUMAN
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-log10 FDR of Ref (A) ASB
-log10 FDR of Alt (T) ASB
Details
Transcription factors
Cell types
Uniprot ID | Effect size Ref | Effect size Alt | FDR Ref | FDR Alt | Mean BAD | Motif fold change | Motif concordance | |
|---|---|---|---|---|---|---|---|---|
| MCM3_HUMAN | 3.46 | -3.18 | 1.00 | n/a | n/a | |||
| KDM1A_HUMAN | 2.02 | -1.44 | 1.00 | n/a | n/a | |||
| ARI1B_HUMAN | 1.60 | -1.60 | 1.00 | n/a | n/a | |||
| FOXK2_HUMAN | 2.15 | -0.59 | 1.17 | n/a | No Hit | |||
| SOX6_HUMAN | 3.27 | -3.41 | 1.00 | n/a | No Hit |
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Motif analysis
