rs561762687 chr11:71639370 G>T
- Sequence
ggcgtgtccgcggtgcgtgcgagc[G/T]gccagcagagggcgctagagagcc
- ASB in cell types
- HeLa S3 (cervical adenocarcinoma) HeLa (cervical adenocarcinoma) KB (cervical adenocarcinoma) HeLa-Tet-On
- ASB for transcription factors
- CTCF_HUMAN RAD21_HUMAN
View in PheLiGe Color scale
-log10 FDR of Ref (G) ASB
-log10 FDR of Alt (T) ASB
Details
Transcription factors
Cell types
Uniprot ID | Effect size Ref | Effect size Alt | FDR Ref | FDR Alt | Mean BAD | Motif fold change | Motif concordance | |
|---|---|---|---|---|---|---|---|---|
| CTCF_HUMAN | 1.60 | -0.15 | 1.54 | -2.25 | Concordant | |||
| RAD21_HUMAN | 1.82 | 0.06 | 1.21 | n/a | n/a |
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Motif analysis
