rs562261004 chr9:107819902 C>T
- Sequence
catcagtgtgctgggacaggcgtg[C/T]gcaccgcaccaagccagctgaggc
- ASB in cell types
- MCF7 (Invasive ductal breast carcinoma)
- ASB for transcription factors
- AHR_HUMAN FOXA1_HUMAN
View in PheLiGe Color scale
-log10 FDR of Ref (C) ASB
-log10 FDR of Alt (T) ASB
Details
Transcription factors
Cell types
Uniprot ID | Effect size Ref | Effect size Alt | FDR Ref | FDR Alt | Mean BAD | Motif fold change | Motif concordance | |
|---|---|---|---|---|---|---|---|---|
| AHR_HUMAN | 2.66 | -0.03 | 2.00 | -1.82 | Weak Concordant | |||
| FOXA1_HUMAN | 0.74 | 0.10 | 1.89 | n/a | No Hit |
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Motif analysis
