rs56229162 chr16:46390789 A>G
- Sequence
aatcgaatggaatcatcatcgaat[A/G]caatagaatggaatcatcaaatgg
- ASB in cell types
- PANC1 (pancreatic ductal adenocarcinoma) CTV-1 (Adult T acute lymphoblastic leukemia) HepG2 (hepatoblastoma) MCF7L-P(immortalized breast epithelial cell line)
- ASB for transcription factors
- CTCF_HUMAN FOXA2_HUMAN ETS1_HUMAN KDM3A_HUMAN
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-log10 FDR of Ref (A) ASB
-log10 FDR of Alt (G) ASB
Details
Transcription factors
Cell types
Uniprot ID | Effect size Ref | Effect size Alt | FDR Ref | FDR Alt | Mean BAD | Motif fold change | Motif concordance | |
|---|---|---|---|---|---|---|---|---|
| CTCF_HUMAN | 2.92 | -4.96 | 2.00 | n/a | No Hit | |||
| FOXA2_HUMAN | 3.19 | n/a | 2.00 | n/a | No Hit | |||
| ETS1_HUMAN | 2.63 | n/a | 2.50 | n/a | No Hit | |||
| KDM3A_HUMAN | 2.81 | n/a | 2.00 | n/a | n/a |
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