rs56335024 chr1:40821030 T>C
- Sequence
ccaaacccaagcctcactcagccc[T/C]tccttatctctcctccccagggta
- ASB in cell types
- K562 (myelogenous leukemia) CD34+ hematopoietic stem cells-derived proerythroblasts
- ASB for transcription factors
- IKZF1_HUMAN ARI1B_HUMAN HTF4_HUMAN VEZF1_HUMAN
View in PheLiGe Color scale
-log10 FDR of Ref (T) ASB
-log10 FDR of Alt (C) ASB
Details
Transcription factors
Cell types
Uniprot ID | Effect size Ref | Effect size Alt | FDR Ref | FDR Alt | Mean BAD | Motif fold change | Motif concordance | |
|---|---|---|---|---|---|---|---|---|
| IKZF1_HUMAN | 2.29 | -0.21 | 1.17 | n/a | n/a | |||
| ARI1B_HUMAN | 0.38 | -0.38 | 1.00 | n/a | n/a | |||
| HTF4_HUMAN | 0.47 | -0.45 | 1.00 | n/a | No Hit | |||
| VEZF1_HUMAN | -1.78 | 1.96 | 1.25 | 4.31 | Concordant | |||
| SMCA4_HUMAN | 0.65 | -0.66 | 1.00 | n/a | n/a |
Items per page:
1 – 5 of 9
Motif analysis
