rs566101293 chr17:63985236 A>G
- Sequence
gtacacacacacacacgcgcgcac[A/G]cacacacacacacacacacacaca
- ASB in cell types
- K562 (myelogenous leukemia) HUVEC-C (HUVEC, umbilical vein endothelial cells) EA.hy 926 (human umbilical vein endothelial cell line)
- ASB for transcription factors
- ZSCA4_HUMAN KAISO_HUMAN SUH_HUMAN HIF1A_HUMAN
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-log10 FDR of Ref (A) ASB
-log10 FDR of Alt (G) ASB
Details
Transcription factors
Cell types
Uniprot ID | Effect size Ref | Effect size Alt | FDR Ref | FDR Alt | Mean BAD | Motif fold change | Motif concordance | |
|---|---|---|---|---|---|---|---|---|
| ZSCA4_HUMAN | 2.35 | -3.84 | 1.50 | -0.11 | Weak Concordant | |||
| KAISO_HUMAN | n/a | 2.21 | 2.00 | n/a | No Hit | |||
| SUH_HUMAN | 2.47 | -4.70 | 2.00 | n/a | No Hit | |||
| HIF1A_HUMAN | n/a | 2.69 | 2.00 | 3.95 | Concordant |
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Motif analysis
