rs566629525 chr8:23163600 C>G
- Sequence
cgcgcgctctgctccctcgcggcc[C/G]ggtcgctcctgcccagcccgggca
- ASB in cell types
- GM19238 (female B-cells lymphoblastoid cell lines) lymphoblastoid cells
- ASB for transcription factors
- CTCF_HUMAN STAG1_HUMAN
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-log10 FDR of Ref (C) ASB
-log10 FDR of Alt (G) ASB
Details
Transcription factors
Cell types
Uniprot ID | Effect size Ref | Effect size Alt | FDR Ref | FDR Alt | Mean BAD | Motif fold change | Motif concordance | |
|---|---|---|---|---|---|---|---|---|
| CTCF_HUMAN | 1.99 | -2.08 | 2.30 | 1.12 | Weak Discordant | |||
| STAG1_HUMAN | 1.87 | n/a | 3.25 | n/a | n/a |
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Motif analysis
