rs566974071 chr7:150876986 C>T
- Sequence
cgcctttcccccacccccccgcct[C/T]ctccccaccaccccgcccacacct
- ASB in cell types
- MS-1 (Small cell lung carcinoma) K562 (myelogenous leukemia)
- ASB for transcription factors
- CTCF_HUMAN VEZF1_HUMAN
View in PheLiGe Color scale
-log10 FDR of Ref (C) ASB
-log10 FDR of Alt (T) ASB
Details
Transcription factors
Cell types
Uniprot ID | Effect size Ref | Effect size Alt | FDR Ref | FDR Alt | Mean BAD | Motif fold change | Motif concordance | |
|---|---|---|---|---|---|---|---|---|
| CTCF_HUMAN | 0.71 | 2.01 | 1.48 | n/a | No Hit | |||
| VEZF1_HUMAN | 2.15 | n/a | 1.50 | -2.22 | Concordant |
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Motif analysis
