rs56929265 chr13:112942946 C>T
- Sequence
cagcaccctcgtgagctgctgttc[C/T]atttttccttctgtatttaggatt
- ASB in cell types
- HEK293 (embryonic kidney) GM19240 (B cells Lymphoblastoid Cell Lines) epidermal keratinocytes 22RV1 (prostate carcinoma)
- ASB for transcription factors
- ZN189_HUMAN ZN341_HUMAN IKZF3_HUMAN ANDR_HUMAN
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-log10 FDR of Ref (C) ASB
-log10 FDR of Alt (T) ASB
Details
Transcription factors
Cell types
Uniprot ID | Effect size Ref | Effect size Alt | FDR Ref | FDR Alt | Mean BAD | Motif fold change | Motif concordance | |
|---|---|---|---|---|---|---|---|---|
| ZN189_HUMAN | 3.33 | n/a | 2.00 | -6.26 | Concordant | |||
| ZN341_HUMAN | 2.25 | n/a | 2.00 | -1.85 | Weak Concordant | |||
| IKZF3_HUMAN | 2.01 | n/a | 2.00 | n/a | n/a | |||
| ANDR_HUMAN | 2.98 | -5.49 | 2.00 | 0.83 | Weak Discordant |
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Motif analysis
