rs571294551 chr3:141414898 T>C
- Sequence
gcctctgttgacactttattgacc[T/C]tccacacaccctggaatttacagt
- ASB in cell types
- A549 (lung carcinoma)
- ASB for transcription factors
- JUN_HUMAN GCR_HUMAN EP300_HUMAN FOXA1_HUMAN
View in PheLiGe Color scale
-log10 FDR of Ref (T) ASB
-log10 FDR of Alt (C) ASB
Details
Transcription factors
Cell types
Uniprot ID | Effect size Ref | Effect size Alt | FDR Ref | FDR Alt | Mean BAD | Motif fold change | Motif concordance | |
|---|---|---|---|---|---|---|---|---|
| JUN_HUMAN | 2.72 | -0.15 | 2.00 | n/a | No Hit | |||
| GCR_HUMAN | 1.61 | n/a | 2.60 | n/a | No Hit | |||
| EP300_HUMAN | 2.04 | -4.75 | 2.75 | n/a | n/a | |||
| FOXA1_HUMAN | 2.07 | -3.38 | 2.00 | -0.63 | Weak Concordant | |||
| GATA3_HUMAN | 2.58 | -1.59 | 2.00 | n/a | No Hit |
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Motif analysis
