rs571396462 chr9:39036696 A>G
- Sequence
gatggtctcgatctcctgaccttc[A/G]tgatccacctgcctcggcctccca
- ASB in cell types
- BEAS-2B (bronchial epithelium) HepG2 (hepatoblastoma) HT1080 (fibrosarcoma) LNCaP (prostate carcinoma)
- ASB for transcription factors
- GCR_HUMAN SSRP1_HUMAN CTCF_HUMAN
View in PheLiGe Color scale
-log10 FDR of Ref (A) ASB
-log10 FDR of Alt (G) ASB
Details
Transcription factors
Cell types
Uniprot ID | Effect size Ref | Effect size Alt | FDR Ref | FDR Alt | Mean BAD | Motif fold change | Motif concordance | |
|---|---|---|---|---|---|---|---|---|
| GCR_HUMAN | 2.60 | -1.78 | 1.00 | n/a | No Hit | |||
| SSRP1_HUMAN | 2.87 | -2.94 | 1.00 | n/a | n/a | |||
| CTCF_HUMAN | 2.27 | n/a | 1.00 | n/a | No Hit |
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