rs571455034 chr19:1207990 G>A
- Sequence
cccagctggtgggggtggccgggg[G/A]tgtccctgccttatcgcagccaga
- ASB in cell types
- MCF7 (Invasive ductal breast carcinoma) breast tumor
- ASB for transcription factors
- ESR1_HUMAN CTCF_HUMAN ZFX_HUMAN
View in PheLiGe Color scale
-log10 FDR of Ref (G) ASB
-log10 FDR of Alt (A) ASB
Details
Transcription factors
Cell types
Uniprot ID | Effect size Ref | Effect size Alt | FDR Ref | FDR Alt | Mean BAD | Motif fold change | Motif concordance | |
|---|---|---|---|---|---|---|---|---|
| ESR1_HUMAN | 1.29 | 1.48 | 1.88 | -2.71 | Discordant | |||
| CTCF_HUMAN | -0.08 | 1.29 | 1.76 | n/a | No Hit | |||
| ZFX_HUMAN | -1.42 | 2.07 | 1.00 | n/a | No Hit |
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Motif analysis
