rs572118964 chr2:64653720 G>A
- Sequence
gagtgccccgctccaggggcccga[G/A]ggtggcgccggggagcgggcagca
- ASB in cell types
- GM19240 (B cells Lymphoblastoid Cell Lines) GM19238 (female B-cells lymphoblastoid cell lines)
- ASB for transcription factors
- CTCF_HUMAN STAG1_HUMAN
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-log10 FDR of Ref (G) ASB
-log10 FDR of Alt (A) ASB
Details
Transcription factors
Cell types
Uniprot ID | Effect size Ref | Effect size Alt | FDR Ref | FDR Alt | Mean BAD | Motif fold change | Motif concordance | |
|---|---|---|---|---|---|---|---|---|
| CTCF_HUMAN | -1.64 | 1.49 | 1.33 | 3.75 | Concordant | |||
| STAG1_HUMAN | -0.87 | 1.26 | 1.00 | n/a | n/a |
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Motif analysis
