rs573898836 chr7:156949592 C>G
- Sequence
cgcctgccccgggcgccacctgcc[C/G]ggctgcccccgcacccggctccgc
- ASB in cell types
- MS-1 (Small cell lung carcinoma) Jurkat (T-cells)
- ASB for transcription factors
- CTCF_HUMAN
View in PheLiGe Color scale
-log10 FDR of Ref (C) ASB
-log10 FDR of Alt (G) ASB
Details
Transcription factors
Cell types
Uniprot ID | Effect size Ref | Effect size Alt | FDR Ref | FDR Alt | Mean BAD | Motif fold change | Motif concordance | |
|---|---|---|---|---|---|---|---|---|
| CTCF_HUMAN | -0.55 | 1.25 | 1.20 | 5.56 | Concordant |
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Motif analysis
