rs574293455 chr20:58447960 T>C
- Sequence
ccttctcggtgtagaggccactgc[T/C]tccccctgctggagatggcatttc
- ASB in cell types
- WA09 (embryonic stem cells)
- ASB for transcription factors
- CTCF_HUMAN
View in PheLiGe Color scale
-log10 FDR of Ref (T) ASB
-log10 FDR of Alt (C) ASB
Details
Transcription factors
Cell types
Uniprot ID | Effect size Ref | Effect size Alt | FDR Ref | FDR Alt | Mean BAD | Motif fold change | Motif concordance | |
|---|---|---|---|---|---|---|---|---|
| CTCF_HUMAN | 1.86 | -0.10 | 1.15 | 1.40 | Weak Discordant |
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Motif analysis
