rs575001900 chr17:78314378 G>A
- Sequence
gcctcccttcccggtattctcgcg[G/A]ccacccggtggaaggtggcgccac
- ASB in cell types
- transverse colon esophagus muscularis mucosa tibial nerve
- ASB for transcription factors
- EP300_HUMAN CTCF_HUMAN
View in PheLiGe Color scale
-log10 FDR of Ref (G) ASB
-log10 FDR of Alt (A) ASB
Details
Transcription factors
Cell types
Uniprot ID | Effect size Ref | Effect size Alt | FDR Ref | FDR Alt | Mean BAD | Motif fold change | Motif concordance | |
|---|---|---|---|---|---|---|---|---|
| EP300_HUMAN | 1.94 | -0.15 | 1.21 | n/a | n/a | |||
| CTCF_HUMAN | 1.27 | -0.09 | 1.00 | -1.47 | Weak Concordant |
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Motif analysis
