rs5763094 chr22:29245752 G>T
- Sequence
tgatagtgcactgcaggaactgga[G/T]tgactgtgctgggcctgcccacct
- ASB in cell types
- TMD8 (diffuse large B-cell lymphoma) adult erythroblasts ID00014 (lymphoblastoid cell, DiGeorge syndrome) hASC (preadipocytes)
- ASB for transcription factors
- KDM6A_HUMAN ITF2_HUMAN
View in PheLiGe Color scale
-log10 FDR of Ref (G) ASB
-log10 FDR of Alt (T) ASB
Details
Transcription factors
Cell types
Uniprot ID | Effect size Ref | Effect size Alt | FDR Ref | FDR Alt | Mean BAD | Motif fold change | Motif concordance | |
|---|---|---|---|---|---|---|---|---|
| KDM6A_HUMAN | 2.49 | n/a | 2.50 | n/a | n/a | |||
| ITF2_HUMAN | 2.42 | n/a | 1.75 | n/a | No Hit |
Items per page:
1 – 2 of 2
Motif analysis
No data available
Genetic associations
GTEx eQTL Adipose_Subcutaneous, Adipose_Visceral_Omentum, Adrenal_Gland, Artery_Tibial, Cells_Cultured_fibroblasts, Lung, Nerve_Tibial, Pancreas, Skin_Sun_Exposed_Lower_leg, Thyroid