rs57645050 chr7:11760458 G>A
- Sequence
atggctgttcctcattatgtgaat[G/A]ttcctcattatgtgaatgttcctc
- ASB in cell types
- CTV-1 (Adult T acute lymphoblastic leukemia) A549 (lung carcinoma) 22RV1 (prostate carcinoma)
- ASB for transcription factors
- SPI1_HUMAN GCR_HUMAN ANDR_HUMAN
View in PheLiGe Color scale
-log10 FDR of Ref (G) ASB
-log10 FDR of Alt (A) ASB
Details
Transcription factors
Cell types
Uniprot ID | Effect size Ref | Effect size Alt | FDR Ref | FDR Alt | Mean BAD | Motif fold change | Motif concordance | |
|---|---|---|---|---|---|---|---|---|
| SPI1_HUMAN | 2.43 | 0.12 | 1.10 | -2.66 | Concordant | |||
| GCR_HUMAN | 2.74 | -4.79 | 2.00 | -13.15 | Concordant | |||
| ANDR_HUMAN | 2.03 | 0.24 | 2.00 | -4.05 | Concordant |
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Motif analysis
