rs576875943 chr7:155297654 T>C
- Sequence
tccgtgccgaggctcccgcccgag[T/C]gcgcgcgggccggcggtggcgtgt
- ASB in cell types
- GM19240 (B cells Lymphoblastoid Cell Lines)
- ASB for transcription factors
- CTCF_HUMAN
View in PheLiGe Color scale
-log10 FDR of Ref (T) ASB
-log10 FDR of Alt (C) ASB
Details
Transcription factors
Cell types
Uniprot ID | Effect size Ref | Effect size Alt | FDR Ref | FDR Alt | Mean BAD | Motif fold change | Motif concordance | |
|---|---|---|---|---|---|---|---|---|
| CTCF_HUMAN | 2.55 | 0.29 | 1.33 | 0.14 | Weak Discordant |
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Motif analysis
