rs57706003 chr5:143124747 A>G
- Sequence
cacaagtccagccagattcaaggc[A/G]gggggagctagatgccacctctgg
- ASB in cell types
- CD34+ hematopoietic stem cells-derived proerythroblasts HT1080 (fibrosarcoma)
- ASB for transcription factors
- GATA1_HUMAN CTCF_HUMAN
View in PheLiGe Color scale
-log10 FDR of Ref (A) ASB
-log10 FDR of Alt (G) ASB
Details
Transcription factors
Cell types
Uniprot ID | Effect size Ref | Effect size Alt | FDR Ref | FDR Alt | Mean BAD | Motif fold change | Motif concordance | |
|---|---|---|---|---|---|---|---|---|
| GATA1_HUMAN | 2.46 | -1.50 | 2.00 | n/a | No Hit | |||
| CTCF_HUMAN | 1.36 | n/a | 2.00 | -2.49 | Concordant |
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Motif analysis
