rs5770874 chr22:50542389 C>A
- Sequence
gatgttttgtctctggaatactaa[C/A]gctctttcagtcaggtgttcccca
- ASB in cell types
- GM12878 (female B-cells lymphoblastoid cell line)
- ASB for transcription factors
- IKZF1_HUMAN BHE40_HUMAN
View in PheLiGe Color scale
-log10 FDR of Ref (C) ASB
-log10 FDR of Alt (A) ASB
Details
Transcription factors
Cell types
Uniprot ID | Effect size Ref | Effect size Alt | FDR Ref | FDR Alt | Mean BAD | Motif fold change | Motif concordance | |
|---|---|---|---|---|---|---|---|---|
| IKZF1_HUMAN | -1.63 | 1.85 | 1.25 | n/a | n/a | |||
| BHE40_HUMAN | -2.29 | 1.50 | 1.33 | n/a | No Hit |
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