rs577796797 chr2:11344335 C>T
- Sequence
gggcccgcccggcccagcccggcc[C/T]agcccggcccggccctgccgggag
- ASB for transcription factors
- IKZF1_HUMAN COT1_HUMAN
View in PheLiGe Color scale
-log10 FDR of Ref (C) ASB
-log10 FDR of Alt (T) ASB
Details
Transcription factors
Cell types
Uniprot ID | Effect size Ref | Effect size Alt | FDR Ref | FDR Alt | Mean BAD | Motif fold change | Motif concordance | |
|---|---|---|---|---|---|---|---|---|
| IKZF1_HUMAN | -1.99 | 2.34 | 1.00 | n/a | n/a | |||
| COT1_HUMAN | 2.17 | -2.16 | 1.00 | n/a | No Hit |
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Motif analysis
No data available
Genetic associations
GTEx eQTL Adipose_Subcutaneous, Artery_Tibial, Cells_Cultured_fibroblasts, Esophagus_Muscularis, Muscle_Skeletal, Pancreas, Whole_Blood