rs58415489 chr19:1951648 C>T
- Sequence
atgtgcaggctgggcgggaggaag[C/T]ggtgagagtccacccctccccacc
- ASB in cell types
- CTV-1 (Adult T acute lymphoblastic leukemia) ICN12 (primary pre-B acute lymphomablastic leukemia)
- ASB for transcription factors
- SPI1_HUMAN PBX1_HUMAN ETS1_HUMAN
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-log10 FDR of Ref (C) ASB
-log10 FDR of Alt (T) ASB
Details
Transcription factors
Cell types
Uniprot ID | Effect size Ref | Effect size Alt | FDR Ref | FDR Alt | Mean BAD | Motif fold change | Motif concordance | |
|---|---|---|---|---|---|---|---|---|
| SPI1_HUMAN | -0.34 | 2.88 | 1.08 | 3.12 | Concordant | |||
| PBX1_HUMAN | n/a | 1.29 | 1.33 | n/a | No Hit | |||
| ETS1_HUMAN | -2.48 | 2.73 | 1.00 | 2.98 | Concordant |
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Motif analysis
