rs58428160 chr17:45277314 G>A

Sequence
ctattcctcccccctccccgctta[G/A]tagacttgtcctccttcctagctg
ASB in cell types
neutrophils from periferal blood epidermal keratinocytes neutrophils

Color scale

color scale ref
-log10 FDR of Ref (G) ASB
color scale alt
-log10 FDR of Alt (A) ASB

Details

Cell type
Effect size Ref
Effect size Alt
FDR Ref
FDR Alt
Mean BAD
neutrophils from periferal blood 0.89 3.21 1.002.6·10-7 2.00
epidermal keratinocytes 2.05 -1.04 8.9·10-31.00 2.00
neutrophils 2.23 -0.13 0.031.00 1.50
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Motif analysis

No data available

Genetic associations

GTEx eQTL Esophagus_Mucosa Skin_Sun_Exposed_Lower_leg Whole_Blood

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