rs58439903 chr11:69686241 C>T
- Sequence
ccgtttactttttctttttctttt[C/T]ttttcttttttttttgagaccgag
- ASB in cell types
- PANC1 (pancreatic ductal adenocarcinoma) GM02630 (Fanconi anemi) GM19193 (female B-cells Lymphoblastoid Cell Lines) GM18486 (Lymphoblastoid Cell Lines)
- ASB for transcription factors
- CTCF_HUMAN STAG1_HUMAN
View in PheLiGe Color scale
-log10 FDR of Ref (C) ASB
-log10 FDR of Alt (T) ASB
Details
Transcription factors
Cell types
Uniprot ID | Effect size Ref | Effect size Alt | FDR Ref | FDR Alt | Mean BAD | Motif fold change | Motif concordance | |
|---|---|---|---|---|---|---|---|---|
| CTCF_HUMAN | 1.48 | 0.56 | 1.31 | n/a | No Hit | |||
| STAG1_HUMAN | 0.87 | 0.13 | 1.12 | n/a | n/a |
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