rs58478996 chr15:97909522 C>T
- Sequence
gcctaacacggttcctgtaggaat[C/T]ggggctgctcaaggctgagaggta
- ASB in cell types
- A549 (lung carcinoma) Kelly (neuroblastoma) glioblastoma cells GM18526 (B – cells Lymphoblastoid Cell Lines)
- ASB for transcription factors
- CTCF_HUMAN RAD21_HUMAN
View in PheLiGe Color scale
-log10 FDR of Ref (C) ASB
-log10 FDR of Alt (T) ASB
Details
Transcription factors
Cell types
Uniprot ID | Effect size Ref | Effect size Alt | FDR Ref | FDR Alt | Mean BAD | Motif fold change | Motif concordance | |
|---|---|---|---|---|---|---|---|---|
| CTCF_HUMAN | 1.21 | 0.27 | 1.12 | n/a | No Hit | |||
| RAD21_HUMAN | 1.02 | 0.24 | 1.04 | n/a | n/a |
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