rs58542948 chr22:46501934 C>T
- Sequence
ttcattctgaaggagcagaggaag[C/T]tcattacatttttataaactactc
- ASB in cell types
- FaDu(Hypopharyngeal squamous cell carcinoma) BEAS-2B (bronchial epithelium)
- ASB for transcription factors
- TF65_HUMAN GCR_HUMAN
View in PheLiGe Color scale
-log10 FDR of Ref (C) ASB
-log10 FDR of Alt (T) ASB
Details
Transcription factors
Cell types
Uniprot ID | Effect size Ref | Effect size Alt | FDR Ref | FDR Alt | Mean BAD | Motif fold change | Motif concordance | |
|---|---|---|---|---|---|---|---|---|
| TF65_HUMAN | n/a | 1.48 | 3.33 | n/a | No Hit | |||
| GCR_HUMAN | -0.20 | 1.95 | 1.00 | 3.88 | Concordant |
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Motif analysis
