rs58547031 chr21:42533115 G>T
- Sequence
ctgaagagggggggcaggacttcc[G/T]gctgctgcctgcctgggcactggg
- ASB in cell types
- primary B-CLL cells monocytes from periferal blood 22RV1 (prostate carcinoma)
- ASB for transcription factors
- BRD4_HUMAN ANDR_HUMAN SRBP2_HUMAN
View in PheLiGe Color scale
-log10 FDR of Ref (G) ASB
-log10 FDR of Alt (T) ASB
Details
Transcription factors
Cell types
Uniprot ID | Effect size Ref | Effect size Alt | FDR Ref | FDR Alt | Mean BAD | Motif fold change | Motif concordance | |
|---|---|---|---|---|---|---|---|---|
| BRD4_HUMAN | 2.73 | n/a | 2.00 | n/a | n/a | |||
| ANDR_HUMAN | 2.73 | n/a | 2.00 | n/a | No Hit | |||
| SRBP2_HUMAN | 2.49 | 0.74 | 3.00 | n/a | No Hit |
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Motif analysis
No data available
Genetic associations
GTEx eQTL Adipose_Subcutaneous, Skin_Not_Sun_Exposed_Suprapubic, Skin_Sun_Exposed_Lower_leg, Thyroid