rs58643351 chr3:27060546 T>C
- Sequence
ctgggcagtggtttcatgggtgtt[T/C]gccttataataattcactgagcta
- ASB in cell types
- LNCaP (prostate carcinoma)
- ASB for transcription factors
- FOXA1_HUMAN ANDR_HUMAN TLE3_HUMAN
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-log10 FDR of Ref (T) ASB
-log10 FDR of Alt (C) ASB
Details
Transcription factors
Cell types
Uniprot ID | Effect size Ref | Effect size Alt | FDR Ref | FDR Alt | Mean BAD | Motif fold change | Motif concordance | |
|---|---|---|---|---|---|---|---|---|
| FOXA1_HUMAN | 2.04 | -0.10 | 1.89 | -4.21 | Concordant | |||
| ANDR_HUMAN | 2.01 | -0.21 | 1.88 | 5.95 | Discordant | |||
| TLE3_HUMAN | 1.58 | -2.56 | 1.50 | n/a | n/a |
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Motif analysis
