rs58648683 chr12:121687272 A>G
- Sequence
agtttggggcggggactgtcccca[A/G]tgctccgcagcaaggttactcgac
- ASB in cell types
- adult erythroblasts CD14+ monocytes Th1-cells monocytes from periferal blood
- ASB for transcription factors
- STAT1_HUMAN RBBP5_HUMAN TBX21_HUMAN SRBP2_HUMAN
View in PheLiGe Color scale
-log10 FDR of Ref (A) ASB
-log10 FDR of Alt (G) ASB
Details
Transcription factors
Cell types
Uniprot ID | Effect size Ref | Effect size Alt | FDR Ref | FDR Alt | Mean BAD | Motif fold change | Motif concordance | |
|---|---|---|---|---|---|---|---|---|
| STAT1_HUMAN | 3.12 | -5.64 | 2.00 | n/a | No Hit | |||
| RBBP5_HUMAN | 2.46 | n/a | 2.00 | n/a | n/a | |||
| TBX21_HUMAN | -1.42 | 1.88 | 1.00 | n/a | No Hit | |||
| SRBP2_HUMAN | 1.74 | -0.69 | 3.00 | n/a | No Hit |
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Motif analysis
No data available
Genetic associations
GTEx eQTL Artery_Aorta, Brain_Cortex, Esophagus_Mucosa, Skin_Not_Sun_Exposed_Suprapubic, Skin_Sun_Exposed_Lower_leg, Whole_Blood