rs58653451 chr19:51422090 C>A
- Sequence
ctcgggctgtgctgcagttcagga[C/A]gccgcccccagggggcgctccacc
- ASB in cell types
- THP-1 (acute monocytic leukemia) GM19239 (male B-cells lymphoblastoid cell line) Ishikawa (endometrial adenocarcinoma) gastroesophageal sphincter
- ASB for transcription factors
- RAD21_HUMAN STAG1_HUMAN KDM6A_HUMAN
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-log10 FDR of Ref (C) ASB
-log10 FDR of Alt (A) ASB
Details
Transcription factors
Cell types
Uniprot ID | Effect size Ref | Effect size Alt | FDR Ref | FDR Alt | Mean BAD | Motif fold change | Motif concordance | |
|---|---|---|---|---|---|---|---|---|
| RAD21_HUMAN | 0.56 | 1.35 | 1.22 | n/a | n/a | |||
| STAG1_HUMAN | 0.50 | 0.97 | 1.09 | n/a | n/a | |||
| KDM6A_HUMAN | 1.95 | n/a | 2.50 | n/a | n/a |
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