rs58655370 chr1:154607982 C>A
- Sequence
acggcggcgaaggtccaaggccgg[C/A]ccggcttacctgccgcggattcat
- ASB in cell types
- GM12878 (female B-cells lymphoblastoid cell line) 22RV1 (prostate carcinoma) BEAS-2B (bronchial epithelium) CD14+ monocytes
- ASB for transcription factors
- STAT1_HUMAN ANDR_HUMAN GCR_HUMAN MEF2B_HUMAN
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-log10 FDR of Ref (C) ASB
-log10 FDR of Alt (A) ASB
Details
Transcription factors
Cell types
Uniprot ID | Effect size Ref | Effect size Alt | FDR Ref | FDR Alt | Mean BAD | Motif fold change | Motif concordance | |
|---|---|---|---|---|---|---|---|---|
| STAT1_HUMAN | 1.97 | -1.03 | 1.50 | n/a | No Hit | |||
| ANDR_HUMAN | 2.41 | -1.22 | 2.00 | n/a | No Hit | |||
| GCR_HUMAN | 0.95 | 0.53 | 1.06 | n/a | No Hit | |||
| MEF2B_HUMAN | -1.82 | 2.22 | 1.00 | n/a | No Hit |
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