rs58678374 chr11:46243308 G>A
- Sequence
gagtgacagccaaagctcccaggc[G/A]accacagaggatctcaaacccttc
- ASB in cell types
- K562 (myelogenous leukemia) adrenal gland
- ASB for transcription factors
- RFX1_HUMAN CTCF_HUMAN NRF1_HUMAN SRBP2_HUMAN
View in PheLiGe Color scale
-log10 FDR of Ref (G) ASB
-log10 FDR of Alt (A) ASB
Details
Transcription factors
Cell types
Uniprot ID | Effect size Ref | Effect size Alt | FDR Ref | FDR Alt | Mean BAD | Motif fold change | Motif concordance | |
|---|---|---|---|---|---|---|---|---|
| RFX1_HUMAN | n/a | 1.63 | 2.75 | 4.75 | Concordant | |||
| CTCF_HUMAN | 0.17 | 1.36 | 1.09 | n/a | No Hit | |||
| NRF1_HUMAN | -0.57 | 1.40 | 2.00 | n/a | No Hit | |||
| SRBP2_HUMAN | 2.54 | 0.21 | 2.00 | 2.75 | Discordant | |||
| SMCA4_HUMAN | 0.70 | 1.36 | 1.12 | n/a | n/a |
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Motif analysis
